Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AL137783.1-201ENST00000623494 1896 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 ISCA2P1-201ENST00000425548 448 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 LDHBP1-201ENST00000455730 1119 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 RPL18P13-201ENST00000478088 569 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 MIR5572-201ENST00000583188 137 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AC132192.2-201ENST00000596206 1147 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AL132994.2-201ENST00000603120 687 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 AP000346.4-201ENST00000614827 381 ntBASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH11YQ9BZA8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PKD1P1-201ENST00000458669 6805 ntBASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 CICP13-201ENST00000422015 2789 ntBASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PDIA3P2-201ENST00000428073 158 ntBASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 AC116345.2-201ENST00000512837 523 ntBASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 SNORD3B-2-202ENST00000571722 791 ntBASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 AC020922.3-201ENST00000595064 547 ntBASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH11YQ9BZA8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11YQ9BZA8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms