Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SPCS2P4-201ENST00000436160 681 ntBASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 RBPMS2P1-201ENST00000437762 623 ntBASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 INGX-202ENST00000489074 768 ntBASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 AC138649.4-201ENST00000612222 287 ntBASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM55Q9BYV6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 TUBB3P1-201ENST00000405796 1332 ntBASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 AKAP8P1-201ENST00000434743 1349 ntBASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 MIR943-201ENST00000401286 94 ntBASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 AL512356.2-201ENST00000546955 174 ntBASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 AP001059.3-201ENST00000619053 235 ntBASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM55Q9BYV6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 KLF2P3-201ENST00000451977 1087 ntBASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM55Q9BYV6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms