Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 ZNF890P-202ENST00000530367 1156 ntBASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAF4Q9BUZ4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 TCAF1P1-201ENST00000414990 2232 ntBASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 RN7SL618P-201ENST00000477850 296 ntBASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 CR383656.12-201ENST00000549567 513 ntBASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 AC026979.3-201ENST00000607315 403 ntBASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 AC004840.1-201ENST00000636359 365 ntBASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 AL031731.1-201ENST00000642131 2094 ntBASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAF4Q9BUZ4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms