Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
VGLL1Q99990 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
VGLL1Q99990 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
VGLL1Q99990 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.78□□□□□ -0.52
VGLL1Q99990 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.78□□□□□ -0.52
VGLL1Q99990 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 CBFB-203ENST00000561924 584 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.78□□□□□ -0.52
VGLL1Q99990 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.78□□□□□ -0.52
VGLL1Q99990 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 AC026120.1-201ENST00000611536 926 ntBASIC11.78□□□□□ -0.52
VGLL1Q99990 AC120114.3-201ENST00000611923 658 ntBASIC11.78□□□□□ -0.52
VGLL1Q99990 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 CICP11-201ENST00000434745 2827 ntBASIC11.78□□□□□ -0.52
VGLL1Q99990 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.77□□□□□ -0.52
VGLL1Q99990 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.77□□□□□ -0.52
VGLL1Q99990 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.77□□□□□ -0.52
VGLL1Q99990 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.77□□□□□ -0.52
VGLL1Q99990 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
VGLL1Q99990 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
VGLL1Q99990 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
VGLL1Q99990 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VGLL1Q99990 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VGLL1Q99990 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VGLL1Q99990 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 AC136604.1-201ENST00000418535 575 ntBASIC11.77□□□□□ -0.53
VGLL1Q99990 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.77□□□□□ -0.53
VGLL1Q99990 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.77□□□□□ -0.53
VGLL1Q99990 TIMM8BP1-201ENST00000452384 211 ntBASIC11.77□□□□□ -0.53
VGLL1Q99990 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
VGLL1Q99990 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.77□□□□□ -0.53
VGLL1Q99990 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.77□□□□□ -0.53
VGLL1Q99990 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 SLC25A39P2-201ENST00000537614 270 ntBASIC11.77□□□□□ -0.53
VGLL1Q99990 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.77□□□□□ -0.53
VGLL1Q99990 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.77□□□□□ -0.53
VGLL1Q99990 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.77□□□□□ -0.53
VGLL1Q99990 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VGLL1Q99990 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.77□□□□□ -0.53
VGLL1Q99990 FAM197Y3-203ENST00000618346 717 ntBASIC11.77□□□□□ -0.53
VGLL1Q99990 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms