Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 ST20-AS1-201ENST00000560255 4223 ntBASIC12.8□□□□□ -0.36
S1PR3Q99500 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.8□□□□□ -0.36
S1PR3Q99500 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
S1PR3Q99500 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.8□□□□□ -0.36
S1PR3Q99500 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.8□□□□□ -0.36
S1PR3Q99500 AC107890.1-201ENST00000422478 521 ntBASIC12.8□□□□□ -0.36
S1PR3Q99500 PMS2P2-201ENST00000425039 1128 ntBASIC12.8□□□□□ -0.36
S1PR3Q99500 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 HIST3H2BA-201ENST00000436555 524 ntBASIC12.8□□□□□ -0.36
S1PR3Q99500 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.8□□□□□ -0.36
S1PR3Q99500 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.8□□□□□ -0.36
S1PR3Q99500 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.8□□□□□ -0.36
S1PR3Q99500 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.8□□□□□ -0.36
S1PR3Q99500 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.8□□□□□ -0.36
S1PR3Q99500 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.8□□□□□ -0.36
S1PR3Q99500 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 AC051619.7-201ENST00000568314 623 ntBASIC12.8□□□□□ -0.36
S1PR3Q99500 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 MST1L-201ENST00000442552 2185 ntBASIC12.8□□□□□ -0.36
S1PR3Q99500 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 AC091951.1-201ENST00000512854 2465 ntBASIC12.8□□□□□ -0.36
S1PR3Q99500 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.8□□□□□ -0.36
S1PR3Q99500 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
S1PR3Q99500 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.79□□□□□ -0.36
S1PR3Q99500 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
S1PR3Q99500 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 TARDBPP1-201ENST00000442013 1203 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.79□□□□□ -0.36
S1PR3Q99500 SLED1-202ENST00000512051 380 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 AC069120.2-201ENST00000524091 540 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 AC140878.1-201ENST00000565277 250 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.79□□□□□ -0.36
S1PR3Q99500 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.79□□□□□ -0.36
S1PR3Q99500 AL033527.5-202ENST00000641632 1098 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms