Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
RAB40CQ96S21 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB40CQ96S21 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB40CQ96S21 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RAB40CQ96S21 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB40CQ96S21 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.58□□□□□ -0.39
RAB40CQ96S21 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 GHSR-202ENST00000427970 912 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 AC098831.1-202ENST00000438821 336 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AC079776.4-201ENST00000511039 504 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 CYP4F24P-201ENST00000586049 1580 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AL359881.3-201ENST00000602640 1721 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AC010507.1-201ENST00000633895 436 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 CICP11-201ENST00000434745 2827 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 LINC01230-201ENST00000625222 3017 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB40CQ96S21 AC015656.1-201ENST00000624209 3578 ntBASIC12.58□□□□□ -0.4
RAB40CQ96S21 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RAB40CQ96S21 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB40CQ96S21 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 HCG4B-203ENST00000450128 991 ntBASIC12.57□□□□□ -0.4
RAB40CQ96S21 UNC93B6-202ENST00000528242 690 ntBASIC12.57□□□□□ -0.4
RAB40CQ96S21 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB40CQ96S21 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms