Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 AC008825.2-201ENST00000603374 718 ntBASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 AC079328.2-201ENST00000561241 3354 ntBASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 ISCA2P1-201ENST00000425548 448 ntBASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 VDAC1P1-201ENST00000439229 848 ntBASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 MIR7845-201ENST00000618396 99 ntBASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 AC006453.1-201ENST00000636037 1257 ntBASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 AC011840.2-201ENST00000563063 1520 ntBASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 AC084018.2-201ENST00000613093 2607 ntBASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 AC009090.5-201ENST00000624886 2285 ntBASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CRAMP1Q96RY5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 AL137783.1-201ENST00000623494 1896 ntBASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 CYP2T1P-202ENST00000641596 2535 ntBASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 RN7SKP230-201ENST00000365642 335 ntBASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 AC009779.1-201ENST00000551138 283 ntBASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CRAMP1Q96RY5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms