Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF48Q96MX3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
ZNF48Q96MX3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AL355994.2-201ENST00000447882 704 ntBASIC12.58□□□□□ -0.4
ZNF48Q96MX3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 DRD5P1-201ENST00000456605 1438 ntBASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AC026410.3-201ENST00000514280 936 ntBASIC12.58□□□□□ -0.4
ZNF48Q96MX3 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.58□□□□□ -0.4
ZNF48Q96MX3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AC104640.1-201ENST00000562617 2109 ntBASIC12.58□□□□□ -0.4
ZNF48Q96MX3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF48Q96MX3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF48Q96MX3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms