Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 MRPS18AP1-201ENST00000414458 589 ntBASIC15.7■□□□□ 0.1
RTP4Q96DX8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.7■□□□□ 0.1
RTP4Q96DX8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 AC005225.4-201ENST00000557330 545 ntBASIC15.7■□□□□ 0.1
RTP4Q96DX8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 AC012645.4-201ENST00000610691 1061 ntBASIC15.7■□□□□ 0.1
RTP4Q96DX8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 AC005912.2-201ENST00000619492 2400 ntBASIC15.7■□□□□ 0.1
RTP4Q96DX8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RTP4Q96DX8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTP4Q96DX8 AC063926.2-201ENST00000623766 1308 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AC018442.1-201ENST00000421439 2061 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AC004066.1-201ENST00000502488 802 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 SERBP1P5-201ENST00000510079 1181 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 SPDYE18-201ENST00000510091 1050 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.69■□□□□ 0.1
RTP4Q96DX8 SRD5A3P1-201ENST00000603021 949 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 AC005089.1-201ENST00000619486 2241 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 CLK3P2-201ENST00000427566 1453 ntBASIC15.69■□□□□ 0.1
RTP4Q96DX8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTP4Q96DX8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC093525.8-201ENST00000624099 1342 ntBASIC15.68■□□□□ 0.1
RTP4Q96DX8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RTP4Q96DX8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTP4Q96DX8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms