Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 C1QBPP1-201ENST00000400117 770 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 HMGN1P19-201ENST00000436976 333 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AL359711.2-201ENST00000563105 872 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC124283.3-201ENST00000570869 594 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC007431.3-201ENST00000623221 587 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 ACE3P-201ENST00000423435 1973 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AL360270.3-201ENST00000609118 1348 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TMEM54Q969K7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 AC103702.1-201ENST00000548801 2630 ntBASIC13.57□□□□□ -0.24
TMEM54Q969K7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM54Q969K7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 KRT8P22-201ENST00000562317 1415 ntBASIC13.56□□□□□ -0.24
TMEM54Q969K7 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.56□□□□□ -0.24
TMEM54Q969K7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 TERF1P3-201ENST00000505638 1227 ntBASIC13.56□□□□□ -0.24
TMEM54Q969K7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.56□□□□□ -0.24
TMEM54Q969K7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 AL596257.1-201ENST00000641463 2694 ntBASIC13.56□□□□□ -0.24
TMEM54Q969K7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM54Q969K7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM54Q969K7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms