Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.33■□□□□ 0.2
ATP2A3Q93084 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 AC073347.1-201ENST00000421633 2643 ntBASIC16.33■□□□□ 0.2
ATP2A3Q93084 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 KRT8P22-201ENST00000562317 1415 ntBASIC16.33■□□□□ 0.2
ATP2A3Q93084 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 AC144831.1-201ENST00000573312 2656 ntBASIC16.32■□□□□ 0.2
ATP2A3Q93084 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 AC023824.1-201ENST00000562945 2975 ntBASIC16.32■□□□□ 0.2
ATP2A3Q93084 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 PHKG1P2-201ENST00000457537 863 ntBASIC16.32■□□□□ 0.2
ATP2A3Q93084 FAM86LP-201ENST00000478302 853 ntBASIC16.32■□□□□ 0.2
ATP2A3Q93084 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 SLED1-202ENST00000512051 380 ntBASIC16.32■□□□□ 0.2
ATP2A3Q93084 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATP2A3Q93084 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP2A3Q93084 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP2A3Q93084 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ATP2A3Q93084 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms