Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
DDX1Q92499 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DDX1Q92499 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.4■□□□□ 0.22
DDX1Q92499 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.4■□□□□ 0.22
DDX1Q92499 DOC2GP-202ENST00000514950 1163 ntBASIC16.4■□□□□ 0.22
DDX1Q92499 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
DDX1Q92499 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
DDX1Q92499 AC099568.2-201ENST00000609194 695 ntBASIC16.4■□□□□ 0.22
DDX1Q92499 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DDX1Q92499 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.4■□□□□ 0.22
DDX1Q92499 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
DDX1Q92499 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
DDX1Q92499 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 DRD5P1-201ENST00000456605 1438 ntBASIC16.39■□□□□ 0.21
DDX1Q92499 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
DDX1Q92499 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.39■□□□□ 0.21
DDX1Q92499 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.39■□□□□ 0.21
DDX1Q92499 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
DDX1Q92499 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 GNAQP1-201ENST00000444815 1067 ntBASIC16.39■□□□□ 0.21
DDX1Q92499 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 RN7SL399P-201ENST00000471648 279 ntBASIC16.39■□□□□ 0.21
DDX1Q92499 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.39■□□□□ 0.21
DDX1Q92499 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
DDX1Q92499 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
DDX1Q92499 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.39■□□□□ 0.21
DDX1Q92499 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 AC106881.1-201ENST00000605849 3329 ntBASIC16.39■□□□□ 0.21
DDX1Q92499 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DDX1Q92499 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DDX1Q92499 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms