Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 HNRNPA1P34-201ENST00000391992 950 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 AL450346.2-201ENST00000495602 1024 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 TUBA3GP-201ENST00000410028 1325 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 AC096677.3-201ENST00000413162 387 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 CRIP1P2-201ENST00000425396 228 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 RN7SL564P-201ENST00000496309 250 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 PCTP-206ENST00000573500 919 ntTSL 3 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 AL691432.1-201ENST00000596308 1422 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE2Q8WXH0 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 AC145285.1-201ENST00000469929 694 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 PRDX2P3-201ENST00000515779 586 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 VENTXP3-201ENST00000546480 773 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 AP005121.2-201ENST00000583306 1101 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 AC007274.3-201ENST00000619838 385 ntBASIC6□□□□□ -1.45
SYNE2Q8WXH0 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SYNE2Q8WXH0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 TPT1P9-201ENST00000413759 514 ntBASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 AC012572.1-201ENST00000581634 397 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 MIR3188-201ENST00000583494 85 ntBASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 RPSAP67-201ENST00000584105 862 ntBASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE2Q8WXH0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms