Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 HSPA7-201ENST00000445535 1927 ntBASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC44A1Q8WWI5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AC117489.1-201ENST00000625169 3217 ntBASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 MTND6P24-201ENST00000440466 518 ntBASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AL079307.3-201ENST00000556114 283 ntBASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AP001267.2-201ENST00000532619 2086 ntBASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 AC027601.5-201ENST00000624065 2482 ntBASIC15.48■□□□□ 0.07
SLC44A1Q8WWI5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 KRT18P13-201ENST00000400056 1290 ntBASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 CEND1P1-201ENST00000451006 455 ntBASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AC007787.1-201ENST00000588095 1583 ntBASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AC041040.2-201ENST00000622926 2899 ntBASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms