Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AC099521.3-201ENST00000624251 2938 ntBASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AC073389.1-201ENST00000595595 795 ntBASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 PPT1-213ENST00000641319 2388 ntBASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 AC012508.2-201ENST00000567613 1472 ntBASIC13.23□□□□□ -0.29
SMIM4Q8WVI0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 AC105206.1-202ENST00000314927 2368 ntBASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 AC211429.1-201ENST00000415277 523 ntBASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 AC105339.3-201ENST00000560043 636 ntBASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms