Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 AC005225.4-201ENST00000557330 545 ntBASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 AC012508.2-201ENST00000567613 1472 ntBASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 AC013726.1-201ENST00000563747 2285 ntBASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 SPDYE19P-201ENST00000338590 713 ntBASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 PIN1P1-201ENST00000412108 996 ntBASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 FAM86LP-201ENST00000478302 853 ntBASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 TPRX2P-201ENST00000535362 881 ntBASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
PCDH19Q8TAB3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 LINC01101-201ENST00000622953 1884 ntBASIC15.91■□□□□ 0.14
PCDH19Q8TAB3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms