Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 AC002347.1-201ENST00000569543 541 ntBASIC15.1■□□□□ 0.01
HIPK4Q8NE63 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HIPK4Q8NE63 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 AL450487.1-201ENST00000426799 995 ntBASIC15.09■□□□□ 0.01
HIPK4Q8NE63 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 PMS2P7-201ENST00000506558 1336 ntBASIC15.09■□□□□ 0.01
HIPK4Q8NE63 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIPK4Q8NE63 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.08■□□□□ 0.01
HIPK4Q8NE63 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HIPK4Q8NE63 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HIPK4Q8NE63 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HIPK4Q8NE63 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HIPK4Q8NE63 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HIPK4Q8NE63 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.08■□□□□ 0
HIPK4Q8NE63 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HIPK4Q8NE63 IGHV3-22-201ENST00000520721 359 ntBASIC15.08■□□□□ 0
HIPK4Q8NE63 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.08■□□□□ 0
HIPK4Q8NE63 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
HIPK4Q8NE63 AC104692.2-201ENST00000603054 253 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms