Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 AC023511.2-201ENST00000618803 211 ntBASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 AF228730.6-201ENST00000641497 218 ntBASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 AC084121.3-201ENST00000641716 218 ntBASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LSMEM1Q8N8F7 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LSMEM1Q8N8F7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 KRT18P43-201ENST00000469825 1281 ntBASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 LINC01115-203ENST00000606068 577 ntBASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 CICP11-201ENST00000434745 2827 ntBASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AL139385.1-201ENST00000611744 3272 ntBASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.2□□□□□ -0.14
LSMEM1Q8N8F7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
LSMEM1Q8N8F7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms