Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC012441.1-201ENST00000446669 685 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AL355864.2-201ENST00000447420 863 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 SLC25A47P1-201ENST00000531577 414 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AC106886.1-201ENST00000568660 600 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AC007787.1-201ENST00000588095 1583 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 BTNL10-201ENST00000595971 695 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AC233724.13-201ENST00000598383 410 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AP005019.2-201ENST00000615104 511 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AC134312.5-201ENST00000568031 1313 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 AC105917.1-201ENST00000506637 2539 ntBASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 AL645937.2-201ENST00000396808 931 ntBASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 AC022137.2-201ENST00000503482 481 ntBASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 KRT18P25-201ENST00000508931 1278 ntBASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 AL162274.1-201ENST00000617191 1098 ntBASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 CICP11-201ENST00000434745 2827 ntBASIC15.12■□□□□ 0.01
LRRTM4Q86VH4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AC005229.1-201ENST00000392885 409 ntBASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms