Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM5Q71RC9 AP000593.2-201ENST00000542775 1433 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 AC011840.2-201ENST00000563063 1520 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 HLA-J-204ENST00000495278 958 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 SCARNA21-201ENST00000517026 139 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 AC090857.1-201ENST00000527400 390 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 AC132192.2-201ENST00000596206 1147 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 AC138894.2-201ENST00000602838 371 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 AC010491.1-201ENST00000563101 2797 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 SHC1P1-201ENST00000425230 1745 ntBASIC19.17■□□□□ 0.66
SMIM5Q71RC9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SMIM5Q71RC9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 CICP13-201ENST00000422015 2789 ntBASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 AC009779.1-201ENST00000551138 283 ntBASIC19.16■□□□□ 0.66
SMIM5Q71RC9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 AC008805.1-201ENST00000590892 364 ntBASIC19.16■□□□□ 0.66
SMIM5Q71RC9 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 MEG3_2.1-201ENST00000611456 105 ntBASIC19.16■□□□□ 0.66
SMIM5Q71RC9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 NKILA-202ENST00000614771 2598 ntBASIC19.16■□□□□ 0.66
SMIM5Q71RC9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMIM5Q71RC9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM5Q71RC9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM5Q71RC9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM5Q71RC9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms