Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AC000095.1-201ENST00000603208 874 ntBASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AC004790.1-201ENST00000612686 536 ntBASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AC106028.4-201ENST00000614509 607 ntBASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AC022144.1-201ENST00000602255 1580 ntBASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 AC067930.6-201ENST00000623257 4947 ntBASIC13.92□□□□□ -0.18
NHLRC1Q6VVB1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AL589987.1-201ENST00000453380 819 ntBASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 SPDYE18-201ENST00000510091 1050 ntBASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.91□□□□□ -0.18
NHLRC1Q6VVB1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms