Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 MROH4P-201ENST00000431302 1578 ntBASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AC087641.1-201ENST00000557561 1021 ntBASIC13.6□□□□□ -0.23
C11orf88Q6PI97 SNHG9-202ENST00000564014 471 ntBASIC13.6□□□□□ -0.23
C11orf88Q6PI97 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AC055717.3-201ENST00000622967 595 ntBASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AC004790.2-201ENST00000623588 572 ntBASIC13.6□□□□□ -0.23
C11orf88Q6PI97 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AL353732.1-201ENST00000569618 1459 ntBASIC13.6□□□□□ -0.23
C11orf88Q6PI97 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C11orf88Q6PI97 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 PDPK2P-202ENST00000562415 1191 ntBASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AGAP7P-201ENST00000582299 2062 ntBASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AGAP14-201ENST00000624701 2060 ntBASIC13.59□□□□□ -0.23
C11orf88Q6PI97 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C11orf88Q6PI97 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms