Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 BTBD7P1-201ENST00000447253 1453 ntBASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 REXO1L2P-201ENST00000425429 2069 ntBASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 MRPS18AP1-201ENST00000414458 589 ntBASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 TIMM17BP1-201ENST00000545713 516 ntBASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 AL158212.4-201ENST00000624062 1286 ntBASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF549Q6P9A3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 AC106881.1-201ENST00000605849 3329 ntBASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 AL359258.3-201ENST00000622910 2331 ntBASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 AC022144.1-201ENST00000602255 1580 ntBASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 ACE3P-201ENST00000423435 1973 ntBASIC15.33■□□□□ 0.05
ZNF549Q6P9A3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 AC104457.1-201ENST00000401024 814 ntBASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 AC092183.1-201ENST00000469884 875 ntBASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 AC005498.2-205ENST00000593218 784 ntBASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 SRD5A3P1-201ENST00000603021 949 ntBASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 GPALPP1-207ENST00000611650 899 ntBASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF549Q6P9A3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms