Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 PRYP6-201ENST00000514804 343 ntBASIC12.36□□□□□ -0.43
FAM78BQ5VT40 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 MIR4313-201ENST00000580760 101 ntBASIC12.36□□□□□ -0.43
FAM78BQ5VT40 Z83851.2-201ENST00000609564 659 ntBASIC12.36□□□□□ -0.43
FAM78BQ5VT40 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM78BQ5VT40 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 BEND3P1-201ENST00000421591 1944 ntBASIC12.35□□□□□ -0.43
FAM78BQ5VT40 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 AC092474.2-201ENST00000424288 719 ntBASIC12.35□□□□□ -0.43
FAM78BQ5VT40 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 AL121894.2-201ENST00000602977 491 ntBASIC12.35□□□□□ -0.43
FAM78BQ5VT40 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 AC104109.2-201ENST00000602919 1418 ntBASIC12.35□□□□□ -0.43
FAM78BQ5VT40 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM78BQ5VT40 BNIP3P1-202ENST00000550043 1585 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms