Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RC3H1Q5TC82 AL137783.1-201ENST00000623494 1896 ntBASIC19.08■□□□□ 0.65
RC3H1Q5TC82 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 AC078875.1-201ENST00000431907 724 ntBASIC19.08■□□□□ 0.64
RC3H1Q5TC82 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.08■□□□□ 0.64
RC3H1Q5TC82 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 OR6D1P-202ENST00000641007 5290 ntBASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AC078991.1-201ENST00000437297 610 ntBASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 ALG3P1-201ENST00000508806 1114 ntBASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 DNM1P30-201ENST00000563586 452 ntBASIC19.07■□□□□ 0.64
RC3H1Q5TC82 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AC026803.1-201ENST00000569130 274 ntBASIC19.07■□□□□ 0.64
RC3H1Q5TC82 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AC009884.2-201ENST00000603110 324 ntBASIC19.07■□□□□ 0.64
RC3H1Q5TC82 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RC3H1Q5TC82 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.06■□□□□ 0.64
RC3H1Q5TC82 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 AC114501.1-201ENST00000445949 172 ntBASIC19.06■□□□□ 0.64
RC3H1Q5TC82 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 AC135983.4-201ENST00000564116 1262 ntBASIC19.06■□□□□ 0.64
RC3H1Q5TC82 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RC3H1Q5TC82 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms