Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AC002472.3-201ENST00000640124 621 ntBASIC13.13□□□□□ -0.31
LRRK2Q5S007 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 LINC01783-202ENST00000614408 828 ntBASIC13.12□□□□□ -0.31
LRRK2Q5S007 BX284668.2-205ENST00000619677 828 ntBASIC13.12□□□□□ -0.31
LRRK2Q5S007 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AC011676.5-201ENST00000624864 2660 ntBASIC13.12□□□□□ -0.31
LRRK2Q5S007 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 MIR4313-201ENST00000580760 101 ntBASIC13.12□□□□□ -0.31
LRRK2Q5S007 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 AC144522.1-201ENST00000625111 1658 ntBASIC13.12□□□□□ -0.31
LRRK2Q5S007 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 E2F3P2-201ENST00000447755 1422 ntBASIC13.12□□□□□ -0.31
LRRK2Q5S007 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRK2Q5S007 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRK2Q5S007 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.11□□□□□ -0.31
LRRK2Q5S007 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 AC141586.5-201ENST00000624546 2050 ntBASIC13.11□□□□□ -0.31
LRRK2Q5S007 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 AC105020.1-201ENST00000435356 2205 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms