Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 Z97205.2-201ENST00000564697 1639 ntBASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 AC236430.1-201ENST00000402231 743 ntBASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 AC114501.2-201ENST00000439631 535 ntBASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 AL589987.1-201ENST00000453380 819 ntBASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 SDHAP3-202ENST00000515467 728 ntBASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 AC104794.3-201ENST00000566840 1248 ntBASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 MIR4745-201ENST00000577608 62 ntBASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KHDC1Q4VXA5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AL137784.3-201ENST00000623858 2288 ntBASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 KRT18P64-201ENST00000434946 1219 ntBASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AC002472.2-201ENST00000442739 958 ntBASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AF228730.6-201ENST00000641497 218 ntBASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AC084121.3-201ENST00000641716 218 ntBASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 AC090616.6-203ENST00000579186 1945 ntBASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
KHDC1Q4VXA5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms