Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC097359.3-201ENST00000603982 1210 ntBASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 Z83851.2-201ENST00000609564 659 ntBASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 AP000845.1-201ENST00000581677 2131 ntBASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ANKRD55Q3KP44 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 KRT8P37-201ENST00000451609 1420 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AC098859.1-201ENST00000502915 1238 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 RNA5SP415-201ENST00000517246 115 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 IGHV3-22-201ENST00000520721 359 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 HNRNPUP1-201ENST00000554987 333 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AC145285.3-201ENST00000564603 959 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AC011467.4-201ENST00000594891 528 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 AC152010.1-201ENST00000415779 2006 ntBASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ANKRD55Q3KP44 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms