Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PUDPQ08623 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PUDPQ08623 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.17□□□□□ -0.14
PUDPQ08623 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PUDPQ08623 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PUDPQ08623 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.16□□□□□ -0.14
PUDPQ08623 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.16□□□□□ -0.14
PUDPQ08623 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
PUDPQ08623 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PUDPQ08623 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.16□□□□□ -0.14
PUDPQ08623 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.16□□□□□ -0.14
PUDPQ08623 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.16□□□□□ -0.14
PUDPQ08623 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.16□□□□□ -0.14
PUDPQ08623 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.16□□□□□ -0.14
PUDPQ08623 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PUDPQ08623 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 FO538757.1-201ENST00000623083 1397 ntBASIC14.16□□□□□ -0.14
PUDPQ08623 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 AC009090.5-201ENST00000624886 2285 ntBASIC14.16□□□□□ -0.14
PUDPQ08623 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.16□□□□□ -0.14
PUDPQ08623 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PUDPQ08623 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PUDPQ08623 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.15□□□□□ -0.14
PUDPQ08623 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.15□□□□□ -0.14
PUDPQ08623 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PUDPQ08623 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PUDPQ08623 CICP24-201ENST00000605464 2705 ntBASIC14.15□□□□□ -0.14
PUDPQ08623 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.15□□□□□ -0.14
PUDPQ08623 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PUDPQ08623 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PUDPQ08623 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PUDPQ08623 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PUDPQ08623 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.15□□□□□ -0.14
PUDPQ08623 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.15□□□□□ -0.14
PUDPQ08623 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms