Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCNA1P78396 TUBB8P8-201ENST00000458717 1058 ntBASIC17.39■□□□□ 0.37
CCNA1P78396 IMP3P2-201ENST00000489760 475 ntBASIC17.39■□□□□ 0.37
CCNA1P78396 AC022217.1-201ENST00000521069 738 ntBASIC17.39■□□□□ 0.37
CCNA1P78396 DUX4L47-201ENST00000566374 394 ntBASIC17.39■□□□□ 0.37
CCNA1P78396 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.39■□□□□ 0.37
CCNA1P78396 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CCNA1P78396 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.39■□□□□ 0.37
CCNA1P78396 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.39■□□□□ 0.37
CCNA1P78396 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNA1P78396 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCNA1P78396 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCNA1P78396 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CCNA1P78396 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CCNA1P78396 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNA1P78396 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.38■□□□□ 0.37
CCNA1P78396 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.38■□□□□ 0.37
CCNA1P78396 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.38■□□□□ 0.37
CCNA1P78396 RN7SL774P-201ENST00000577467 290 ntBASIC17.38■□□□□ 0.37
CCNA1P78396 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.38■□□□□ 0.37
CCNA1P78396 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNA1P78396 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNA1P78396 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.37■□□□□ 0.37
CCNA1P78396 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCNA1P78396 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 DPM3-202ENST00000368399 517 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCNA1P78396 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCNA1P78396 AC104457.1-201ENST00000401024 814 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.37■□□□□ 0.37
CCNA1P78396 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.37■□□□□ 0.37
CCNA1P78396 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.37■□□□□ 0.37
CCNA1P78396 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 AC013355.1-201ENST00000562625 723 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 RN7SL163P-201ENST00000583100 276 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 AL645939.5-201ENST00000606834 243 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 AC022748.3-201ENST00000621828 275 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 FER1L4-210ENST00000615531 5998 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 FKBP4P6-201ENST00000457486 1332 ntBASIC17.37■□□□□ 0.37
CCNA1P78396 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCNA1P78396 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCNA1P78396 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms