Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 CICP14-201ENST00000629111 2732 ntBASIC14.46□□□□□ -0.09
CDH12P55289 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH12P55289 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH12P55289 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH12P55289 WASH3P-207ENST00000560956 1394 ntBASIC14.46□□□□□ -0.1
CDH12P55289 FO538757.1-201ENST00000623083 1397 ntBASIC14.46□□□□□ -0.1
CDH12P55289 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH12P55289 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH12P55289 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDH12P55289 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CDH12P55289 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH12P55289 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 AC112482.1-201ENST00000492080 688 ntBASIC14.45□□□□□ -0.1
CDH12P55289 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 BANF1P1-201ENST00000553684 263 ntBASIC14.45□□□□□ -0.1
CDH12P55289 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH12P55289 AC105021.1-202ENST00000570572 669 ntBASIC14.45□□□□□ -0.1
CDH12P55289 MIR3687-2-201ENST00000577708 61 ntBASIC14.45□□□□□ -0.1
CDH12P55289 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH12P55289 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH12P55289 MIR3687-1-201ENST00000614492 61 ntBASIC14.45□□□□□ -0.1
CDH12P55289 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH12P55289 AC117489.1-201ENST00000625169 3217 ntBASIC14.45□□□□□ -0.1
CDH12P55289 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDH12P55289 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH12P55289 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH12P55289 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH12P55289 AC140479.7-201ENST00000636301 2332 ntBASIC14.44□□□□□ -0.1
CDH12P55289 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH12P55289 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH12P55289 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH12P55289 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH12P55289 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH12P55289 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH12P55289 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH12P55289 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH12P55289 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 AC015656.1-201ENST00000624209 3578 ntBASIC14.44□□□□□ -0.1
CDH12P55289 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.44□□□□□ -0.1
CDH12P55289 GPS2P2-201ENST00000430745 888 ntBASIC14.44□□□□□ -0.1
CDH12P55289 RBPMS2P1-201ENST00000437762 623 ntBASIC14.44□□□□□ -0.1
CDH12P55289 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH12P55289 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
CDH12P55289 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 AC010327.4-202ENST00000591484 748 ntBASIC14.44□□□□□ -0.1
CDH12P55289 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.44□□□□□ -0.1
CDH12P55289 AC003101.2-201ENST00000612557 442 ntBASIC14.44□□□□□ -0.1
CDH12P55289 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH12P55289 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms