Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 POM121L4P-202ENST00000427789 1891 ntBASIC13.14□□□□□ -0.31
NKX2-5P52952 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-5P52952 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-5P52952 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-5P52952 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-5P52952 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX2-5P52952 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 MIR935-201ENST00000401179 91 ntBASIC13.13□□□□□ -0.31
NKX2-5P52952 AL645939.2-201ENST00000427340 991 ntBASIC13.13□□□□□ -0.31
NKX2-5P52952 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
NKX2-5P52952 AC116562.2-201ENST00000507042 360 ntBASIC13.13□□□□□ -0.31
NKX2-5P52952 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX2-5P52952 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-5P52952 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-5P52952 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NKX2-5P52952 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
NKX2-5P52952 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-5P52952 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NKX2-5P52952 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-5P52952 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-5P52952 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-5P52952 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-5P52952 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-5P52952 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX2-5P52952 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NKX2-5P52952 IGHGP-201ENST00000390555 1178 ntBASIC13.12□□□□□ -0.31
NKX2-5P52952 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX2-5P52952 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 AC026366.1-201ENST00000488803 879 ntBASIC13.12□□□□□ -0.31
NKX2-5P52952 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX2-5P52952 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX2-5P52952 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms