Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.01□□□□□ -0.01
PDX1P52945 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 DRD5P1-201ENST00000456605 1438 ntBASIC15□□□□□ -0.01
PDX1P52945 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15□□□□□ -0.01
PDX1P52945 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDX1P52945 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 ZBTB12BP-201ENST00000314232 1122 ntBASIC15□□□□□ -0.01
PDX1P52945 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15□□□□□ -0.01
PDX1P52945 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDX1P52945 RPL13AP20-201ENST00000459725 609 ntBASIC15□□□□□ -0.01
PDX1P52945 ZNF767P-206ENST00000513792 565 ntBASIC15□□□□□ -0.01
PDX1P52945 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15□□□□□ -0.01
PDX1P52945 AC084346.2-201ENST00000607097 949 ntBASIC15□□□□□ -0.01
PDX1P52945 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PDX1P52945 RHOXF1P1-202ENST00000635473 501 ntBASIC15□□□□□ -0.01
PDX1P52945 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
PDX1P52945 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
PDX1P52945 CYP2AB1P-202ENST00000454440 1456 ntBASIC15□□□□□ -0.01
PDX1P52945 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
PDX1P52945 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDX1P52945 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15□□□□□ -0.01
PDX1P52945 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDX1P52945 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
PDX1P52945 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.99□□□□□ -0.01
PDX1P52945 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.99□□□□□ -0.01
PDX1P52945 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.99□□□□□ -0.01
PDX1P52945 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.99□□□□□ -0.01
PDX1P52945 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDX1P52945 BCYRN1-201ENST00000418539 200 ntBASIC14.99□□□□□ -0.01
PDX1P52945 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.99□□□□□ -0.01
PDX1P52945 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.99□□□□□ -0.01
PDX1P52945 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PDX1P52945 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.99□□□□□ -0.01
PDX1P52945 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.99□□□□□ -0.01
PDX1P52945 DUX4L45-201ENST00000566406 1057 ntBASIC14.99□□□□□ -0.01
PDX1P52945 AC015910.1-201ENST00000579400 975 ntBASIC14.99□□□□□ -0.01
PDX1P52945 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.99□□□□□ -0.01
PDX1P52945 AC010328.2-201ENST00000597698 1111 ntBASIC14.99□□□□□ -0.01
PDX1P52945 AC107373.2-201ENST00000607735 490 ntBASIC14.99□□□□□ -0.01
PDX1P52945 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 AC008687.7-202ENST00000637404 953 ntBASIC14.99□□□□□ -0.01
PDX1P52945 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.99□□□□□ -0.01
PDX1P52945 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDX1P52945 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDX1P52945 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms