Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 AC112693.3-201ENST00000624819 1983 ntBASIC14.42□□□□□ -0.1
EFNA3P52797 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNA3P52797 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
EFNA3P52797 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNA3P52797 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.42□□□□□ -0.1
EFNA3P52797 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNA3P52797 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNA3P52797 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNA3P52797 AC009486.1-201ENST00000569860 813 ntBASIC14.42□□□□□ -0.1
EFNA3P52797 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.42□□□□□ -0.1
EFNA3P52797 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNA3P52797 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
EFNA3P52797 AC017083.2-201ENST00000608069 979 ntBASIC14.42□□□□□ -0.1
EFNA3P52797 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNA3P52797 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.42□□□□□ -0.1
EFNA3P52797 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNA3P52797 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 AC007787.1-201ENST00000588095 1583 ntBASIC14.42□□□□□ -0.1
EFNA3P52797 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 AL359258.3-201ENST00000622910 2331 ntBASIC14.42□□□□□ -0.1
EFNA3P52797 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 SSR4P1-203ENST00000599569 2260 ntBASIC14.41□□□□□ -0.1
EFNA3P52797 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.41□□□□□ -0.1
EFNA3P52797 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.41□□□□□ -0.1
EFNA3P52797 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 ACKR1-201ENST00000368121 1240 ntBASIC14.41□□□□□ -0.1
EFNA3P52797 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.41□□□□□ -0.1
EFNA3P52797 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.41□□□□□ -0.1
EFNA3P52797 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.41□□□□□ -0.1
EFNA3P52797 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 MST1L-201ENST00000442552 2185 ntBASIC14.41□□□□□ -0.1
EFNA3P52797 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.41□□□□□ -0.1
EFNA3P52797 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.41□□□□□ -0.1
EFNA3P52797 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
EFNA3P52797 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
EFNA3P52797 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 AC126755.1-201ENST00000525846 6405 ntBASIC14.4□□□□□ -0.1
EFNA3P52797 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms