Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.35□□□□□ -0.27
HCFC1P51610 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
HCFC1P51610 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 AL645937.2-201ENST00000396808 931 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.34□□□□□ -0.27
HCFC1P51610 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 HIST2H2BB-201ENST00000449108 381 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.34□□□□□ -0.27
HCFC1P51610 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 MIR4706-201ENST00000582134 82 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 PKD1P5-201ENST00000532415 10291 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HCFC1P51610 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
HCFC1P51610 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HCFC1P51610 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 AL136309.1-201ENST00000403917 691 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HCFC1P51610 IMP3P2-201ENST00000489760 475 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.34□□□□□ -0.27
HCFC1P51610 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.34□□□□□ -0.27
HCFC1P51610 SAMD11P1-201ENST00000571429 661 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 RN7SL48P-201ENST00000579283 293 ntBASIC13.34□□□□□ -0.27
HCFC1P51610 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.34□□□□□ -0.27
HCFC1P51610 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HCFC1P51610 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.33□□□□□ -0.27
HCFC1P51610 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
HCFC1P51610 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HCFC1P51610 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
HCFC1P51610 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.33□□□□□ -0.27
HCFC1P51610 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
HCFC1P51610 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.33□□□□□ -0.28
HCFC1P51610 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 TPM3P8-201ENST00000330554 643 ntBASIC13.33□□□□□ -0.28
HCFC1P51610 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.33□□□□□ -0.28
HCFC1P51610 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.33□□□□□ -0.28
HCFC1P51610 CD8B2-202ENST00000417670 633 ntBASIC13.33□□□□□ -0.28
HCFC1P51610 AC007274.2-201ENST00000421675 662 ntBASIC13.33□□□□□ -0.28
HCFC1P51610 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.33□□□□□ -0.28
HCFC1P51610 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.33□□□□□ -0.28
HCFC1P51610 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.33□□□□□ -0.28
HCFC1P51610 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.33□□□□□ -0.28
HCFC1P51610 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.33□□□□□ -0.28
HCFC1P51610 AL645939.5-201ENST00000606834 243 ntBASIC13.33□□□□□ -0.28
HCFC1P51610 AC007663.3-201ENST00000609632 465 ntBASIC13.33□□□□□ -0.28
HCFC1P51610 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms