Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX2-1P43699 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 AC079781.5-202ENST00000641784 3743 ntBASIC12.72□□□□□ -0.37
NKX2-1P43699 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 KRT8P37-201ENST00000451609 1420 ntBASIC12.71□□□□□ -0.37
NKX2-1P43699 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NKX2-1P43699 AC010327.5-201ENST00000586923 3061 ntBASIC12.71□□□□□ -0.37
NKX2-1P43699 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX2-1P43699 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NKX2-1P43699 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NKX2-1P43699 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX2-1P43699 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 RPS2P28-201ENST00000314255 741 ntBASIC12.71□□□□□ -0.37
NKX2-1P43699 AC004870.1-201ENST00000315132 882 ntBASIC12.71□□□□□ -0.37
NKX2-1P43699 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 RPS8P6-201ENST00000426177 609 ntBASIC12.71□□□□□ -0.37
NKX2-1P43699 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NKX2-1P43699 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.71□□□□□ -0.37
NKX2-1P43699 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NKX2-1P43699 AL121912.1-201ENST00000603683 238 ntBASIC12.71□□□□□ -0.37
NKX2-1P43699 AL691432.3-201ENST00000621860 400 ntBASIC12.71□□□□□ -0.37
NKX2-1P43699 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX2-1P43699 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.71□□□□□ -0.37
NKX2-1P43699 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.71□□□□□ -0.37
NKX2-1P43699 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-1P43699 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NKX2-1P43699 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.71□□□□□ -0.38
NKX2-1P43699 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.71□□□□□ -0.38
NKX2-1P43699 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
NKX2-1P43699 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.71□□□□□ -0.38
NKX2-1P43699 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
NKX2-1P43699 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.71□□□□□ -0.38
NKX2-1P43699 CICP11-201ENST00000434745 2827 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.7□□□□□ -0.38
NKX2-1P43699 MTHFR-210ENST00000641407 2387 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-1P43699 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-1P43699 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
NKX2-1P43699 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-1P43699 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.7□□□□□ -0.38
NKX2-1P43699 AC140658.5-201ENST00000438532 169 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 FAAHP1-202ENST00000446499 1238 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-1P43699 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.7□□□□□ -0.38
NKX2-1P43699 AF186996.4-201ENST00000467186 377 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 AC108751.1-201ENST00000490852 363 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.7□□□□□ -0.38
NKX2-1P43699 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX2-1P43699 UNC93B7-201ENST00000509439 705 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NKX2-1P43699 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
NKX2-1P43699 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 AC011467.4-201ENST00000594891 528 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX2-1P43699 AL161645.1-201ENST00000622716 1255 ntBASIC12.7□□□□□ -0.38
NKX2-1P43699 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NKX2-1P43699 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms