Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRPHP41219 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PRPHP41219 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRPHP41219 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRPHP41219 AP000845.1-201ENST00000581677 2131 ntBASIC17.44■□□□□ 0.38
PRPHP41219 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRPHP41219 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PRPHP41219 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.44■□□□□ 0.38
PRPHP41219 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPHP41219 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRPHP41219 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRPHP41219 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.43■□□□□ 0.38
PRPHP41219 AC004066.1-201ENST00000502488 802 ntBASIC17.43■□□□□ 0.38
PRPHP41219 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.43■□□□□ 0.38
PRPHP41219 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.43■□□□□ 0.38
PRPHP41219 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.43■□□□□ 0.38
PRPHP41219 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.43■□□□□ 0.38
PRPHP41219 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
PRPHP41219 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPHP41219 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.43■□□□□ 0.38
PRPHP41219 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.43■□□□□ 0.38
PRPHP41219 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.42■□□□□ 0.38
PRPHP41219 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.42■□□□□ 0.38
PRPHP41219 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 RN7SL204P-201ENST00000582831 262 ntBASIC17.42■□□□□ 0.38
PRPHP41219 LINC02560-201ENST00000596379 459 ntBASIC17.42■□□□□ 0.38
PRPHP41219 AC107373.2-201ENST00000607735 490 ntBASIC17.42■□□□□ 0.38
PRPHP41219 AC093726.1-201ENST00000608064 963 ntBASIC17.42■□□□□ 0.38
PRPHP41219 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 AC008761.3-201ENST00000624803 892 ntBASIC17.42■□□□□ 0.38
PRPHP41219 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
PRPHP41219 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.42■□□□□ 0.38
PRPHP41219 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 AC093525.8-201ENST00000624099 1342 ntBASIC17.42■□□□□ 0.38
PRPHP41219 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRPHP41219 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.42■□□□□ 0.38
PRPHP41219 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PRPHP41219 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRPHP41219 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRPHP41219 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRPHP41219 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms