Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC114501.2-201ENST00000439631 535 ntBASIC15.68■□□□□ 0.1
HADHAP40939 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.68■□□□□ 0.1
HADHAP40939 AC004890.2-204ENST00000481968 304 ntBASIC15.68■□□□□ 0.1
HADHAP40939 AC093214.1-201ENST00000511688 1107 ntBASIC15.68■□□□□ 0.1
HADHAP40939 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.68■□□□□ 0.1
HADHAP40939 AL096865.1-201ENST00000606796 927 ntBASIC15.68■□□□□ 0.1
HADHAP40939 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HADHAP40939 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.68■□□□□ 0.1
HADHAP40939 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 AC023024.2-201ENST00000623561 1993 ntBASIC15.67■□□□□ 0.1
HADHAP40939 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.67■□□□□ 0.1
HADHAP40939 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HADHAP40939 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 AC007292.2-201ENST00000593524 1812 ntBASIC15.67■□□□□ 0.1
HADHAP40939 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.67■□□□□ 0.1
HADHAP40939 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.67■□□□□ 0.1
HADHAP40939 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.67■□□□□ 0.1
HADHAP40939 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.67■□□□□ 0.1
HADHAP40939 RNA5SP421-201ENST00000516864 134 ntBASIC15.67■□□□□ 0.1
HADHAP40939 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.67■□□□□ 0.1
HADHAP40939 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.67■□□□□ 0.1
HADHAP40939 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.67■□□□□ 0.1
HADHAP40939 AL390955.2-201ENST00000603032 514 ntBASIC15.67■□□□□ 0.1
HADHAP40939 LINC01115-203ENST00000606068 577 ntBASIC15.67■□□□□ 0.1
HADHAP40939 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.67■□□□□ 0.1
HADHAP40939 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.67■□□□□ 0.1
HADHAP40939 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HADHAP40939 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HADHAP40939 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HADHAP40939 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 WASH3P-207ENST00000560956 1394 ntBASIC15.66■□□□□ 0.1
HADHAP40939 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HADHAP40939 AC091951.1-201ENST00000512854 2465 ntBASIC15.66■□□□□ 0.1
HADHAP40939 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.66■□□□□ 0.1
HADHAP40939 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HADHAP40939 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HADHAP40939 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms