Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17■□□□□ 0.31
RFC5P40937 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17■□□□□ 0.31
RFC5P40937 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC5P40937 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17■□□□□ 0.31
RFC5P40937 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC5P40937 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17■□□□□ 0.31
RFC5P40937 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RFC5P40937 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.99■□□□□ 0.31
RFC5P40937 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFC5P40937 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 C2orf27AP3-201ENST00000434123 579 ntBASIC16.99■□□□□ 0.31
RFC5P40937 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.99■□□□□ 0.31
RFC5P40937 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.99■□□□□ 0.31
RFC5P40937 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC5P40937 SNX29P1-201ENST00000548357 1007 ntBASIC16.99■□□□□ 0.31
RFC5P40937 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.99■□□□□ 0.31
RFC5P40937 AL354718.3-201ENST00000616414 581 ntBASIC16.99■□□□□ 0.31
RFC5P40937 CR382287.1-201ENST00000623954 586 ntBASIC16.99■□□□□ 0.31
RFC5P40937 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.99■□□□□ 0.31
RFC5P40937 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.99■□□□□ 0.31
RFC5P40937 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.99■□□□□ 0.31
RFC5P40937 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC5P40937 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
RFC5P40937 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.98■□□□□ 0.31
RFC5P40937 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 KRT8P14-201ENST00000414254 1442 ntBASIC16.98■□□□□ 0.31
RFC5P40937 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RFC5P40937 AC105917.1-201ENST00000506637 2539 ntBASIC16.98■□□□□ 0.31
RFC5P40937 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.98■□□□□ 0.31
RFC5P40937 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 RPL7P3-201ENST00000441388 714 ntBASIC16.98■□□□□ 0.31
RFC5P40937 KLF2P4-201ENST00000451959 1225 ntBASIC16.98■□□□□ 0.31
RFC5P40937 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RFC5P40937 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 AP000812.2-201ENST00000538934 718 ntBASIC16.98■□□□□ 0.31
RFC5P40937 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.98■□□□□ 0.31
RFC5P40937 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 AC025279.2-201ENST00000569730 653 ntBASIC16.98■□□□□ 0.31
RFC5P40937 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 AC145423.3-201ENST00000615987 467 ntBASIC16.98■□□□□ 0.31
RFC5P40937 MIR6775-201ENST00000617557 69 ntBASIC16.98■□□□□ 0.31
RFC5P40937 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.98■□□□□ 0.31
RFC5P40937 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 LINC02228-204ENST00000642115 2962 ntBASIC16.98■□□□□ 0.31
RFC5P40937 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RFC5P40937 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.98■□□□□ 0.31
RFC5P40937 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms