Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.59■□□□□ 0.41
COPB2P35606 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.58■□□□□ 0.41
COPB2P35606 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPB2P35606 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COPB2P35606 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.58■□□□□ 0.41
COPB2P35606 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPB2P35606 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPB2P35606 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.58■□□□□ 0.41
COPB2P35606 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COPB2P35606 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.58■□□□□ 0.4
COPB2P35606 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.58■□□□□ 0.4
COPB2P35606 CNN2P10-201ENST00000443067 918 ntBASIC17.58■□□□□ 0.4
COPB2P35606 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.58■□□□□ 0.4
COPB2P35606 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.58■□□□□ 0.4
COPB2P35606 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.58■□□□□ 0.4
COPB2P35606 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.58■□□□□ 0.4
COPB2P35606 AC005695.3-201ENST00000614522 232 ntBASIC17.58■□□□□ 0.4
COPB2P35606 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 AC244452.3-201ENST00000636814 210 ntBASIC17.58■□□□□ 0.4
COPB2P35606 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.58■□□□□ 0.4
COPB2P35606 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
COPB2P35606 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPB2P35606 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.58■□□□□ 0.4
COPB2P35606 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.58■□□□□ 0.4
COPB2P35606 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.58■□□□□ 0.4
COPB2P35606 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 AL596257.1-201ENST00000641463 2694 ntBASIC17.57■□□□□ 0.4
COPB2P35606 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.57■□□□□ 0.4
COPB2P35606 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.57■□□□□ 0.4
COPB2P35606 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.57■□□□□ 0.4
COPB2P35606 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COPB2P35606 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 AC079178.1-201ENST00000420915 656 ntBASIC17.57■□□□□ 0.4
COPB2P35606 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.57■□□□□ 0.4
COPB2P35606 AC245100.3-201ENST00000441281 285 ntBASIC17.57■□□□□ 0.4
COPB2P35606 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.57■□□□□ 0.4
COPB2P35606 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.57■□□□□ 0.4
COPB2P35606 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 ZNF767P-206ENST00000513792 565 ntBASIC17.57■□□□□ 0.4
COPB2P35606 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.57■□□□□ 0.4
COPB2P35606 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
COPB2P35606 AP006547.1-201ENST00000563435 692 ntBASIC17.57■□□□□ 0.4
COPB2P35606 SAMD11P1-201ENST00000571429 661 ntBASIC17.57■□□□□ 0.4
COPB2P35606 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.57■□□□□ 0.4
COPB2P35606 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.57■□□□□ 0.4
COPB2P35606 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COPB2P35606 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.57■□□□□ 0.4
COPB2P35606 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPB2P35606 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.57■□□□□ 0.4
COPB2P35606 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 FER1L4-210ENST00000615531 5998 ntBASIC17.56■□□□□ 0.4
COPB2P35606 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COPB2P35606 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COPB2P35606 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPB2P35606 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms