Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.7□□□□□ -0.06
RORAP35398 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.7□□□□□ -0.06
RORAP35398 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.7□□□□□ -0.06
RORAP35398 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RORAP35398 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RORAP35398 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.7□□□□□ -0.06
RORAP35398 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RORAP35398 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.7□□□□□ -0.06
RORAP35398 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
RORAP35398 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RORAP35398 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 AC134312.5-201ENST00000568031 1313 ntBASIC14.69□□□□□ -0.06
RORAP35398 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RORAP35398 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 NORAD-201ENST00000565493 5339 ntBASIC14.69□□□□□ -0.06
RORAP35398 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.69□□□□□ -0.06
RORAP35398 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RORAP35398 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 KLF2P4-201ENST00000451959 1225 ntBASIC14.69□□□□□ -0.06
RORAP35398 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.69□□□□□ -0.06
RORAP35398 AC022137.2-201ENST00000503482 481 ntBASIC14.69□□□□□ -0.06
RORAP35398 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RORAP35398 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.69□□□□□ -0.06
RORAP35398 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.69□□□□□ -0.06
RORAP35398 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.69□□□□□ -0.06
RORAP35398 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RORAP35398 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.69□□□□□ -0.06
RORAP35398 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.69□□□□□ -0.06
RORAP35398 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RORAP35398 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 AC093525.8-201ENST00000624099 1342 ntBASIC14.68□□□□□ -0.06
RORAP35398 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RORAP35398 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.68□□□□□ -0.06
RORAP35398 AP000812.2-201ENST00000538934 718 ntBASIC14.68□□□□□ -0.06
RORAP35398 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 AL033527.4-201ENST00000641026 673 ntBASIC14.68□□□□□ -0.06
RORAP35398 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms