Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.33■□□□□ 0.2
CHRNA3P32297 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA3P32297 WASH3P-207ENST00000560956 1394 ntBASIC16.33■□□□□ 0.2
CHRNA3P32297 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA3P32297 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.33■□□□□ 0.2
CHRNA3P32297 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA3P32297 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.32■□□□□ 0.2
CHRNA3P32297 AC126755.1-201ENST00000525846 6405 ntBASIC16.32■□□□□ 0.2
CHRNA3P32297 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHRNA3P32297 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 AC136604.1-201ENST00000418535 575 ntBASIC16.32■□□□□ 0.2
CHRNA3P32297 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 KRT8P12-202ENST00000472924 1397 ntBASIC16.32■□□□□ 0.2
CHRNA3P32297 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.32■□□□□ 0.2
CHRNA3P32297 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 LINC02560-201ENST00000596379 459 ntBASIC16.32■□□□□ 0.2
CHRNA3P32297 AL844908.2-201ENST00000609461 460 ntBASIC16.32■□□□□ 0.2
CHRNA3P32297 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.32■□□□□ 0.2
CHRNA3P32297 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.32■□□□□ 0.2
CHRNA3P32297 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHRNA3P32297 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHRNA3P32297 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRNA3P32297 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.32■□□□□ 0.2
CHRNA3P32297 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRNA3P32297 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA3P32297 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA3P32297 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.31■□□□□ 0.2
CHRNA3P32297 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA3P32297 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA3P32297 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHRNA3P32297 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRNA3P32297 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRNA3P32297 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 SPDYE17-201ENST00000412399 783 ntBASIC16.31■□□□□ 0.2
CHRNA3P32297 AC009477.1-201ENST00000452936 217 ntBASIC16.31■□□□□ 0.2
CHRNA3P32297 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRNA3P32297 AC008761.3-201ENST00000624803 892 ntBASIC16.31■□□□□ 0.2
CHRNA3P32297 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRNA3P32297 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHRNA3P32297 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRNA3P32297 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRNA3P32297 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA3P32297 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA3P32297 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms