Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 AC006058.4-201ENST00000624016 1670 ntBASIC15.42■□□□□ 0.06
HTR1BP28222 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HTR1BP28222 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.42■□□□□ 0.06
HTR1BP28222 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.42■□□□□ 0.06
HTR1BP28222 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.42■□□□□ 0.06
HTR1BP28222 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.42■□□□□ 0.06
HTR1BP28222 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 AC015910.1-201ENST00000579400 975 ntBASIC15.42■□□□□ 0.06
HTR1BP28222 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 AC233724.13-201ENST00000598383 410 ntBASIC15.42■□□□□ 0.06
HTR1BP28222 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.42■□□□□ 0.06
HTR1BP28222 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.42■□□□□ 0.06
HTR1BP28222 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTR1BP28222 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
HTR1BP28222 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.41■□□□□ 0.06
HTR1BP28222 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.41■□□□□ 0.06
HTR1BP28222 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.41■□□□□ 0.06
HTR1BP28222 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.41■□□□□ 0.06
HTR1BP28222 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.41■□□□□ 0.06
HTR1BP28222 AC093813.1-201ENST00000605066 256 ntBASIC15.41■□□□□ 0.06
HTR1BP28222 AL022328.1-201ENST00000610050 478 ntBASIC15.41■□□□□ 0.06
HTR1BP28222 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.41■□□□□ 0.06
HTR1BP28222 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.41■□□□□ 0.06
HTR1BP28222 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HTR1BP28222 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HTR1BP28222 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
HTR1BP28222 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms