Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GDF1P27539 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GDF1P27539 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14□□□□□ -0.17
GDF1P27539 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
GDF1P27539 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14□□□□□ -0.17
GDF1P27539 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14□□□□□ -0.17
GDF1P27539 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 AC005229.1-201ENST00000392885 409 ntBASIC14□□□□□ -0.17
GDF1P27539 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GDF1P27539 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GDF1P27539 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14□□□□□ -0.17
GDF1P27539 AC012441.1-201ENST00000446669 685 ntBASIC14□□□□□ -0.17
GDF1P27539 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14□□□□□ -0.17
GDF1P27539 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14□□□□□ -0.17
GDF1P27539 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14□□□□□ -0.17
GDF1P27539 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14□□□□□ -0.17
GDF1P27539 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GDF1P27539 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14□□□□□ -0.17
GDF1P27539 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GDF1P27539 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GDF1P27539 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.99□□□□□ -0.17
GDF1P27539 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GDF1P27539 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.99□□□□□ -0.17
GDF1P27539 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GDF1P27539 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 MSTO2P-201ENST00000314835 1709 ntBASIC13.99□□□□□ -0.17
GDF1P27539 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 AC105250.1-201ENST00000509378 2057 ntBASIC13.99□□□□□ -0.17
GDF1P27539 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GDF1P27539 RPL5P21-201ENST00000404620 815 ntBASIC13.99□□□□□ -0.17
GDF1P27539 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.99□□□□□ -0.17
GDF1P27539 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.99□□□□□ -0.17
GDF1P27539 AC004066.1-201ENST00000502488 802 ntBASIC13.99□□□□□ -0.17
GDF1P27539 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.99□□□□□ -0.17
GDF1P27539 AP001889.1-201ENST00000525414 633 ntBASIC13.99□□□□□ -0.17
GDF1P27539 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.99□□□□□ -0.17
GDF1P27539 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.99□□□□□ -0.17
GDF1P27539 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.99□□□□□ -0.17
GDF1P27539 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.99□□□□□ -0.17
GDF1P27539 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.99□□□□□ -0.17
GDF1P27539 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.99□□□□□ -0.17
GDF1P27539 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 AL513477.1-201ENST00000602865 2407 ntBASIC13.99□□□□□ -0.17
GDF1P27539 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GDF1P27539 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.99□□□□□ -0.17
GDF1P27539 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
GDF1P27539 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms