Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 AC112693.3-201ENST00000624819 1983 ntBASIC15.29■□□□□ 0.04
VARSP26640 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.29■□□□□ 0.04
VARSP26640 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VARSP26640 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 AL138828.2-201ENST00000615812 383 ntBASIC15.28■□□□□ 0.04
VARSP26640 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 AC107918.4-201ENST00000641966 3141 ntBASIC15.28■□□□□ 0.04
VARSP26640 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
VARSP26640 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.28■□□□□ 0.04
VARSP26640 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.28■□□□□ 0.04
VARSP26640 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VARSP26640 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
VARSP26640 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VARSP26640 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VARSP26640 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VARSP26640 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.27■□□□□ 0.04
VARSP26640 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.27■□□□□ 0.04
VARSP26640 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VARSP26640 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.27■□□□□ 0.04
VARSP26640 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
VARSP26640 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.27■□□□□ 0.04
VARSP26640 OR8S1-201ENST00000310194 1080 ntBASIC15.27■□□□□ 0.04
VARSP26640 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 FO393414.2-201ENST00000405153 598 ntBASIC15.27■□□□□ 0.04
VARSP26640 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.27■□□□□ 0.04
VARSP26640 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.27■□□□□ 0.04
VARSP26640 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARSP26640 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.27■□□□□ 0.04
VARSP26640 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
VARSP26640 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.27■□□□□ 0.04
VARSP26640 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.27■□□□□ 0.04
VARSP26640 C18orf15-201ENST00000623680 2534 ntBASIC15.27■□□□□ 0.03
VARSP26640 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VARSP26640 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.27■□□□□ 0.03
VARSP26640 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
VARSP26640 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VARSP26640 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.27■□□□□ 0.03
VARSP26640 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VARSP26640 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.27■□□□□ 0.03
VARSP26640 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VARSP26640 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VARSP26640 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VARSP26640 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms