Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.85□□□□□ -0.03
PTX3P26022 AC000095.1-201ENST00000603208 874 ntBASIC14.85□□□□□ -0.03
PTX3P26022 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PTX3P26022 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PTX3P26022 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.85□□□□□ -0.03
PTX3P26022 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.85□□□□□ -0.03
PTX3P26022 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PTX3P26022 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PTX3P26022 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 MROH4P-201ENST00000431302 1578 ntBASIC14.85□□□□□ -0.03
PTX3P26022 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.85□□□□□ -0.03
PTX3P26022 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PTX3P26022 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PTX3P26022 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTX3P26022 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.85□□□□□ -0.03
PTX3P26022 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.85□□□□□ -0.03
PTX3P26022 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 CICP11-201ENST00000434745 2827 ntBASIC14.84□□□□□ -0.03
PTX3P26022 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
PTX3P26022 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.84□□□□□ -0.03
PTX3P26022 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 AC093214.1-201ENST00000511688 1107 ntBASIC14.84□□□□□ -0.03
PTX3P26022 RNA5SP421-201ENST00000516864 134 ntBASIC14.84□□□□□ -0.03
PTX3P26022 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.84□□□□□ -0.03
PTX3P26022 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PTX3P26022 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 SRD5A3P1-201ENST00000603021 949 ntBASIC14.84□□□□□ -0.03
PTX3P26022 AL390955.2-201ENST00000603032 514 ntBASIC14.84□□□□□ -0.03
PTX3P26022 AC008738.7-201ENST00000609744 511 ntBASIC14.84□□□□□ -0.03
PTX3P26022 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PTX3P26022 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.84□□□□□ -0.03
PTX3P26022 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTX3P26022 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PTX3P26022 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTX3P26022 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTX3P26022 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PTX3P26022 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PTX3P26022 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
PTX3P26022 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.83□□□□□ -0.03
PTX3P26022 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTX3P26022 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTX3P26022 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTX3P26022 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTX3P26022 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.83□□□□□ -0.04
PTX3P26022 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTX3P26022 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTX3P26022 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms