Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT4P19013 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KRT4P19013 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KRT4P19013 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
KRT4P19013 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT4P19013 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 RN7SL589P-201ENST00000481268 310 ntBASIC15.55■□□□□ 0.08
KRT4P19013 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT4P19013 FAM86C2P-203ENST00000528684 1004 ntBASIC15.55■□□□□ 0.08
KRT4P19013 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT4P19013 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.55■□□□□ 0.08
KRT4P19013 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.55■□□□□ 0.08
KRT4P19013 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
KRT4P19013 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT4P19013 AC092865.6-201ENST00000642101 219 ntBASIC15.55■□□□□ 0.08
KRT4P19013 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KRT4P19013 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT4P19013 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT4P19013 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
KRT4P19013 AC113367.3-201ENST00000508316 1912 ntBASIC15.55■□□□□ 0.08
KRT4P19013 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT4P19013 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
KRT4P19013 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT4P19013 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
KRT4P19013 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
KRT4P19013 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT4P19013 HLA-A-201ENST00000376802 1334 ntBASIC15.54■□□□□ 0.08
KRT4P19013 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT4P19013 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT4P19013 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT4P19013 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 AL662844.1-201ENST00000546340 181 ntBASIC15.54■□□□□ 0.08
KRT4P19013 AC243562.1-201ENST00000560672 389 ntBASIC15.54■□□□□ 0.08
KRT4P19013 SLC25A6P4-201ENST00000586535 553 ntBASIC15.54■□□□□ 0.08
KRT4P19013 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT4P19013 AC091812.2-201ENST00000619081 385 ntBASIC15.54■□□□□ 0.08
KRT4P19013 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
KRT4P19013 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 ST20-AS1-201ENST00000560255 4223 ntBASIC15.54■□□□□ 0.08
KRT4P19013 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
KRT4P19013 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT4P19013 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
KRT4P19013 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT4P19013 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
KRT4P19013 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT4P19013 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT4P19013 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
KRT4P19013 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
KRT4P19013 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
KRT4P19013 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT4P19013 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 HSPA7-201ENST00000445535 1927 ntBASIC15.53■□□□□ 0.08
KRT4P19013 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT4P19013 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms