Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.82■□□□□ 0.92
ATF3P18847 CHCHD2P9-201ENST00000461726 456 ntBASIC20.82■□□□□ 0.92
ATF3P18847 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.82■□□□□ 0.92
ATF3P18847 AL157813.1-201ENST00000612996 587 ntBASIC20.82■□□□□ 0.92
ATF3P18847 FO393412.1-201ENST00000619841 382 ntBASIC20.82■□□□□ 0.92
ATF3P18847 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC20.82■□□□□ 0.92
ATF3P18847 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATF3P18847 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.82■□□□□ 0.92
ATF3P18847 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATF3P18847 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATF3P18847 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.82■□□□□ 0.92
ATF3P18847 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATF3P18847 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATF3P18847 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATF3P18847 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.81■□□□□ 0.92
ATF3P18847 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.81■□□□□ 0.92
ATF3P18847 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.81■□□□□ 0.92
ATF3P18847 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.81■□□□□ 0.92
ATF3P18847 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.81■□□□□ 0.92
ATF3P18847 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC20.81■□□□□ 0.92
ATF3P18847 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.81■□□□□ 0.92
ATF3P18847 AP000358.1-201ENST00000456260 156 ntBASIC20.81■□□□□ 0.92
ATF3P18847 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
ATF3P18847 C2orf69P1-201ENST00000563532 1093 ntBASIC20.81■□□□□ 0.92
ATF3P18847 AC087392.5-201ENST00000612517 489 ntBASIC20.81■□□□□ 0.92
ATF3P18847 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATF3P18847 AC092299.1-201ENST00000632679 757 ntBASIC20.81■□□□□ 0.92
ATF3P18847 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATF3P18847 AC011840.2-201ENST00000563063 1520 ntBASIC20.81■□□□□ 0.92
ATF3P18847 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 AC020910.5-201ENST00000623668 1865 ntBASIC20.81■□□□□ 0.92
ATF3P18847 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF3P18847 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
ATF3P18847 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATF3P18847 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.8■□□□□ 0.92
ATF3P18847 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 AL583805.1-201ENST00000391389 531 ntBASIC20.8■□□□□ 0.92
ATF3P18847 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC20.8■□□□□ 0.92
ATF3P18847 AL627422.1-201ENST00000434104 580 ntBASIC20.8■□□□□ 0.92
ATF3P18847 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.8■□□□□ 0.92
ATF3P18847 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.8■□□□□ 0.92
ATF3P18847 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC20.8■□□□□ 0.92
ATF3P18847 ALG1L13P-202ENST00000519320 584 ntBASIC20.8■□□□□ 0.92
ATF3P18847 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ATF3P18847 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATF3P18847 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.8■□□□□ 0.92
ATF3P18847 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.8■□□□□ 0.92
ATF3P18847 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATF3P18847 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF3P18847 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATF3P18847 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ATF3P18847 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ATF3P18847 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.79■□□□□ 0.92
ATF3P18847 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.79■□□□□ 0.92
ATF3P18847 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ATF3P18847 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ATF3P18847 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.79■□□□□ 0.92
ATF3P18847 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.79■□□□□ 0.92
ATF3P18847 PHBP15-201ENST00000574228 665 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 335 ms