Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AL078644.1-201ENST00000609881 752 ntBASIC15.04■□□□□ -0
LINGO3P0C6S8 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.04■□□□□ -0
LINGO3P0C6S8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LINGO3P0C6S8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.03■□□□□ -0
LINGO3P0C6S8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINGO3P0C6S8 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 AC097359.2-201ENST00000604992 2389 ntBASIC15.03■□□□□ -0
LINGO3P0C6S8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINGO3P0C6S8 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
LINGO3P0C6S8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 ALG1L5P-201ENST00000482043 771 ntBASIC15.03■□□□□ -0
LINGO3P0C6S8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.03■□□□□ -0
LINGO3P0C6S8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.03■□□□□ -0
LINGO3P0C6S8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.03■□□□□ -0
LINGO3P0C6S8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.03■□□□□ -0
LINGO3P0C6S8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.03■□□□□ -0
LINGO3P0C6S8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.03■□□□□ -0
LINGO3P0C6S8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINGO3P0C6S8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
LINGO3P0C6S8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.02■□□□□ -0
LINGO3P0C6S8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.02■□□□□ -0
LINGO3P0C6S8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.02■□□□□ -0
LINGO3P0C6S8 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 AC011474.4-201ENST00000623523 2076 ntBASIC15.02■□□□□ -0
LINGO3P0C6S8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 WASH6P-202ENST00000359512 1437 ntBASIC15.02■□□□□ -0
LINGO3P0C6S8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
LINGO3P0C6S8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.02■□□□□ -0
LINGO3P0C6S8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.02■□□□□ -0
LINGO3P0C6S8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.02■□□□□ -0
LINGO3P0C6S8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 HTR5BP-201ENST00000430851 1154 ntBASIC15.02■□□□□ -0
LINGO3P0C6S8 ACTG1P14-201ENST00000446382 1122 ntBASIC15.02■□□□□ -0
LINGO3P0C6S8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.02■□□□□ -0
LINGO3P0C6S8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.02■□□□□ -0
LINGO3P0C6S8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.02■□□□□ -0
LINGO3P0C6S8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.02■□□□□ -0
LINGO3P0C6S8 RARRES2P8-201ENST00000566335 367 ntBASIC15.02■□□□□ -0
LINGO3P0C6S8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.02■□□□□ -0
LINGO3P0C6S8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LINGO3P0C6S8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.02■□□□□ -0
LINGO3P0C6S8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LINGO3P0C6S8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
LINGO3P0C6S8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 AC007326.2-201ENST00000624224 7579 ntBASIC15.02□□□□□ -0.01
LINGO3P0C6S8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINGO3P0C6S8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms