Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
FREM3P0C091 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14□□□□□ -0.17
FREM3P0C091 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14□□□□□ -0.17
FREM3P0C091 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14□□□□□ -0.17
FREM3P0C091 RPS2P32-201ENST00000439199 892 ntBASIC14□□□□□ -0.17
FREM3P0C091 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14□□□□□ -0.17
FREM3P0C091 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14□□□□□ -0.17
FREM3P0C091 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14□□□□□ -0.17
FREM3P0C091 SLC25A47P1-201ENST00000531577 414 ntBASIC14□□□□□ -0.17
FREM3P0C091 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14□□□□□ -0.17
FREM3P0C091 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14□□□□□ -0.17
FREM3P0C091 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14□□□□□ -0.17
FREM3P0C091 MIR6775-201ENST00000617557 69 ntBASIC14□□□□□ -0.17
FREM3P0C091 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14□□□□□ -0.17
FREM3P0C091 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FREM3P0C091 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14□□□□□ -0.17
FREM3P0C091 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14□□□□□ -0.17
FREM3P0C091 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14□□□□□ -0.17
FREM3P0C091 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
FREM3P0C091 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
FREM3P0C091 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 KRT223P-202ENST00000449164 1292 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 RN7SL752P-201ENST00000463779 287 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 AC011495.1-201ENST00000498085 584 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.99□□□□□ -0.17
FREM3P0C091 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
FREM3P0C091 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.99□□□□□ -0.17
FREM3P0C091 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
FREM3P0C091 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.99□□□□□ -0.17
FREM3P0C091 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 AC004066.1-201ENST00000502488 802 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 MIR4259-201ENST00000584466 101 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.99□□□□□ -0.17
FREM3P0C091 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 MIR6752-201ENST00000618442 71 ntBASIC13.99□□□□□ -0.17
FREM3P0C091 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.99□□□□□ -0.17
FREM3P0C091 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FREM3P0C091 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
FREM3P0C091 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.99□□□□□ -0.17
FREM3P0C091 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.98□□□□□ -0.17
FREM3P0C091 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.98□□□□□ -0.17
FREM3P0C091 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
FREM3P0C091 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms